- Home
- What We Do
- Digital Standards
- Crystallographic Information Framework
- Software
- Software Directory
CIF Software
Displaying 1 - 20 of 78ADIT
deposition tool for depositing macromolecular structures in the Protein Data Bank
Maintenance Status: Active
ADIT validation server
for checking the format consistency of coordinates and creating validation reports about a structure before deposition in the Protein Data Bank
Maintenance Status: Active
atomes
atomes is a cross-platform open source program developed to analyze, to visualize and to edit/create large three-dimensional atomic scale models.
By regrouping advanced analysis techniques, 3D visualization and 3D edition, atomes introduces innovative 3D rendering possibilities and intuitive applications of the calculation results.
atomes also provides an advanced input preparation system for further calculations using well known classical, ab-initio and QM-MM molecular dynamics codes.
To prepare the input files for these calculations is likely to be the key, and most complicated step towards MD simulations.atomes offers a user-friendly assistant to help and guide the user step by step to achieve this crucial goal.Application Area: Chemistry, Graphics, Materials science, Modelling, Structure, Surface, Visualization
Maintenance Status: Active
Asset ID: 160948
Bibliographic Reference: Le Roux S., Computational Materials Science Volume 253, May 2025, 113805
DOI: https://doi.org/10.1016/j.commatsci.2025.113805
Submitter: Sébastien Le Roux
CBFlib
ANSI-C function library for creating, reading, modifying and writing Crystallographic Binary Files (CBF) and image-supporting CIF (imgCIF) data files.
cciflib
library for supporting the CCIF subset of mmCIF used by the CCP4 program suite
Maintenance Status: Active
checkCIF
reports on the consistency and integrity of crystal structure determinations reported in CIF format
Maintenance Status: Active
CIF++
(obsolete), CIFDOM and Jumbo components of CML (Chemical Markup Language) software
cif2cif
CIF manipulation program for copying CIFs, checking data names against dictionaries, reformatting numbers to preserve standard uncertainties, and extracting requested data subsets.
CIF2CRY
program for converting structural data and reflection data contained in a CIF into instructions to be read by the CRYSTALS program
cif2pdb
Program for converting an mmCIF data set to a partial pseudo-PDB entry, including coordinate, metadata and record sections sufficient to drive RasMol.
cif2sx
Stand-alone program that converts a legal CIF into a legal SHELXL instruction file, with preferred distribution integrated into the WinGX system.
cif2xml
Program that copies a CIF from standard input to an equivalent XML representation while checking data names against dictionaries and reformatting numbers with standard uncertainties.
CIFAPI
Comprehensive C library for reading and writing CIF, supports both 1.1 and 2.0 formats
Maintenance Status: Active
CIFEDIT
Program for viewing and editing CIFs, distributed as part of the ciftools package maintained for powder-CIF related work at NIST.
CIFFOLD
Stand-alone application for folding and unfolding long lines in CIF text fields and comments, including conversion between CIF 1.1 long-line files and 80-column CIF 1.0 workflows.
CIFIO
Primary CIF input/output program in the Xtal system, providing CIF-based data exchange, publication submission support, and ASCII archive-file handling for Xtal binary files.
CIFLIB
Software library that provides simple and convenient access to CIF dictionaries and data files.
Application Area: Structure determination
Maintenance Status: Active
Asset ID: 44649
Bibliographic Reference: Westbrook, J. D. , Hsie, S.-H. & Fitzgerald, P. M. D. (1997). J. Appl. Cryst. 30, 79-83.
CIFOBJ
class library of mmCIF access tools
CIFPARSE
C-language function library providing convenient and efficient access to mmCIF data files, distributed as part of the RCSB Protein Data Bank software stack.
CIFPARSE-OBJ
Object-oriented package for accessing mmCIF data files and data dictionaries, distributed as part of the RCSB Protein Data Bank software stack.