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Software Directory

Displaying 381 - 400 of 976
  • IndED

    Tool for indexing the electron diffraction patters. For given lattice parameters, it calculates the most possible set of all symmetrically equivalent zones. It consists of two sub programs. IndEDr: For known lattice and unknown hkl, it calculates the possible zones using the ratio and the angle between the reciprocal points. IndEDhkl: For known lattice and pair of hkl types, it calculates all possible type of zones and angles which could readyly be transferred on the stereographic (Wulff) net.

  • INDEXINP

    Automatic generation of indexing input files, see CCP14

  • input4MAUD

    Program can be used for automatic input of two-dimensional diffraction image file series into MAUD, covering, for example, a single texture measurement or a batch. It also has the possibility of creating automated batch refinement jobs for MAUD.

    Application Area: Materials science

    Asset ID: 121173

    Bibliographic Reference: Raue, L. (2014). J. Appl. Cryst. 47, 2081-2085

    DOI: https://doi.org/10.1107/S1600576714020470

    Submitter: ab

  • INSTAT

    A computer program for ideal and non-ideal probability density functions of the magnitude of the normalized structure factor.

    Asset ID: 87856

    Bibliographic Reference: Shmueli, U. (2013). J. Appl. Cryst. 46, 1521-1522.

    DOI: https://doi.org/10.1107/S0021889813021390

    Submitter: ab

  • Institute_Pasteur_database

    Institute Pasteur database for software and URLs of interest

    Application Area: Biology

    Asset ID: 47389

  • Interactive Crystallography

    Allows the user to choose from from among the 32 crystallographic point groups, enter the values of the relevant elastic constants, and view the resulting Young's Modulus representation surface. In order to use this package, you must have access to Xmaple and support for HTML forms

    Application Area: Materials science, Topology

    Asset ID: 47393

  • Interprobe

    Software for the handling of chemical structures

    Application Area: Chemistry

    Asset ID: 47397

  • INTLDM

    Stand alone version of LAUEGEN to carry out the stages of processing Laue diffraction spots up to and including the integration of spot intensities.

    Application Area: Diffraction

    Asset ID: 47334

    Bibliographic Reference: Campbell, J. W., Hao, Q., Harding, M. M., Nguti, N. D. & Wilkinson, C. (1998). J. Appl. Cryst. 31, 496-502.

    DOI: https://doi.org/10.1107/S0021889897016683

  • iotbx

    library for CIF input/output and validation; Python library interface and compiled (C++) parser; part of the cctbx suite

    Maintenance Status: Active

  • ISIS/Draw

    Chemical structure drawing program.

    Asset ID: 47338

  • ISODEC

    Program for the calculation of diffraction elastic constants for aggregates with and without preferred orientation. It also calculates stress from lattice strain and vice versa.

    Application Area: Characterization, Diffraction, Materials science

    Asset ID: 78018

    Bibliographic Reference: Gnäupel-Herold, T. (2012). J. Appl. Cryst. 45, 573-574.

    DOI: https://doi.org/10.1107/S0021889812014252

    Submitter: amanda

  • ISODISTORT

    Internet tool for exploring the structural distortion modes of crystalline materials. Provides a GUI to several packages within the ISOTROPY software suite, generates distortion modes induced by irreducible representations of the parent spacegroup symmetry, and also provides an interactive Java applet for visualizing and interactively manipulating the free parameters of each mode.

    Application Area: Structure, Visualization

    Asset ID: 47342

    Bibliographic Reference: Campbell, B. J., Stokes, H. T., Tanner, D. E. & Hatch, D. M. (2006). J. Appl. Cryst. 39, 607-614.

    DOI: https://doi.org/10.1107/S0021889806014075

  • ISOTROPY

    The ISOTROPY software suite is a collection of software tools which applies group theoretical methods to the analysis of phase transitions in crystalline solids. It includes ISOTROPY, ISODISTORT, ISOCIF, FINDSYM, INVARIANTS, and other programs, as well as extensive tables of superspace groups, magnetic space groups and irreducible representations.

    Application Area: Phase transitions, Structure determination, Symmetry, Other

    Asset ID: 47346

  • ISTable

    ( CIFTable ) collection of classes for managing table objects

  • ITO

    Indexing, see CCP14

    Application Area: Chemistry, Minerals, Powder

    Asset ID: 47350

  • IUMSC Java graphics

    Java graphic demonstration for crystallography from IUMSC

    Asset ID: 47355

  • IVTON

    Calculates geometrical parameters of crystal structures.

  • J-ICE

    A new interface for Jmol has been developed, called J-ICE, for handling and visualizing crystallographic and electronic properties entirely via a web server, i.e. without the burden of installing complex packages. J-ICE can also be employed as an import/export tool, to transform universal CIF or Protein Data Bank structure files (from experiment or previous calculations) into an input format compatible with programs such as CRYSTAL09, CASTEP, QUANTUM ESPRESSO and VASP.

    Application Area: Modelling

    Asset ID: 65623

    Bibliographic Reference: Canepa, P., Hanson, R. M., Ugliengo, P. & Alfredsson, M. (2011). J. Appl. Cryst. 44, 225-229.

    DOI: https://doi.org/10.1107/S0021889810049411

    Submitter: ab

  • Jalview

    Multiple alignment editor

    Application Area: Biology

    Asset ID: 50316

  • JaMM

    The JaMM 2.1 applet gives the user several options for examining the molecular structure. It contains three principal screen elements:a model-rendering area (the heart of JaMM),
    a control bar (to select drawing modes and options) and a scrollable output area.

    Application Area: Biology, Visualization, Other

    Asset ID: 114881