- Home
- What We Do
- Early Career & Education
- Directories
- Software Directory
Software Directory
Displaying 381 - 400 of 976IndED
Tool for indexing the electron diffraction patters. For given lattice parameters, it calculates the most possible set of all symmetrically equivalent zones. It consists of two sub programs. IndEDr: For known lattice and unknown hkl, it calculates the possible zones using the ratio and the angle between the reciprocal points. IndEDhkl: For known lattice and pair of hkl types, it calculates all possible type of zones and angles which could readyly be transferred on the stereographic (Wulff) net.
INDEXINP
Automatic generation of indexing input files, see CCP14
input4MAUD
Program can be used for automatic input of two-dimensional diffraction image file series into MAUD, covering, for example, a single texture measurement or a batch. It also has the possibility of creating automated batch refinement jobs for MAUD.
Application Area: Materials science
Asset ID: 121173
Bibliographic Reference: Raue, L. (2014). J. Appl. Cryst. 47, 2081-2085
DOI: https://doi.org/10.1107/S1600576714020470
Submitter: ab
INSTAT
A computer program for ideal and non-ideal probability density functions of the magnitude of the normalized structure factor.
Asset ID: 87856
Bibliographic Reference: Shmueli, U. (2013). J. Appl. Cryst. 46, 1521-1522.
DOI: https://doi.org/10.1107/S0021889813021390
Submitter: ab
Institute_Pasteur_database
Institute Pasteur database for software and URLs of interest
Interactive Crystallography
Allows the user to choose from from among the 32 crystallographic point groups, enter the values of the relevant elastic constants, and view the resulting Young's Modulus representation surface. In order to use this package, you must have access to Xmaple and support for HTML forms
Interprobe
Software for the handling of chemical structures
INTLDM
Stand alone version of LAUEGEN to carry out the stages of processing Laue diffraction spots up to and including the integration of spot intensities.
Application Area: Diffraction
Asset ID: 47334
Bibliographic Reference: Campbell, J. W., Hao, Q., Harding, M. M., Nguti, N. D. & Wilkinson, C. (1998). J. Appl. Cryst. 31, 496-502.
iotbx
library for CIF input/output and validation; Python library interface and compiled (C++) parser; part of the cctbx suite
Maintenance Status: Active
ISIS/Draw
Chemical structure drawing program.
Asset ID: 47338
ISODEC
Program for the calculation of diffraction elastic constants for aggregates with and without preferred orientation. It also calculates stress from lattice strain and vice versa.
Application Area: Characterization, Diffraction, Materials science
Asset ID: 78018
Bibliographic Reference: Gnäupel-Herold, T. (2012). J. Appl. Cryst. 45, 573-574.
DOI: https://doi.org/10.1107/S0021889812014252
Submitter: amanda
ISODISTORT
Internet tool for exploring the structural distortion modes of crystalline materials. Provides a GUI to several packages within the ISOTROPY software suite, generates distortion modes induced by irreducible representations of the parent spacegroup symmetry, and also provides an interactive Java applet for visualizing and interactively manipulating the free parameters of each mode.
Application Area: Structure, Visualization
Asset ID: 47342
Bibliographic Reference: Campbell, B. J., Stokes, H. T., Tanner, D. E. & Hatch, D. M. (2006). J. Appl. Cryst. 39, 607-614.
ISOTROPY
The ISOTROPY software suite is a collection of software tools which applies group theoretical methods to the analysis of phase transitions in crystalline solids. It includes ISOTROPY, ISODISTORT, ISOCIF, FINDSYM, INVARIANTS, and other programs, as well as extensive tables of superspace groups, magnetic space groups and irreducible representations.
Application Area: Phase transitions, Structure determination, Symmetry, Other
Asset ID: 47346
ISTable
( CIFTable ) collection of classes for managing table objects
ITO
Indexing, see CCP14
IUMSC Java graphics
Java graphic demonstration for crystallography from IUMSC
Asset ID: 47355
IVTON
Calculates geometrical parameters of crystal structures.
J-ICE
A new interface for Jmol has been developed, called J-ICE, for handling and visualizing crystallographic and electronic properties entirely via a web server, i.e. without the burden of installing complex packages. J-ICE can also be employed as an import/export tool, to transform universal CIF or Protein Data Bank structure files (from experiment or previous calculations) into an input format compatible with programs such as CRYSTAL09, CASTEP, QUANTUM ESPRESSO and VASP.
Application Area: Modelling
Asset ID: 65623
Bibliographic Reference: Canepa, P., Hanson, R. M., Ugliengo, P. & Alfredsson, M. (2011). J. Appl. Cryst. 44, 225-229.
DOI: https://doi.org/10.1107/S0021889810049411
Submitter: ab
Jalview
Multiple alignment editor
JaMM
The JaMM 2.1 applet gives the user several options for examining the molecular structure. It contains three principal screen elements:a model-rendering area (the heart of JaMM),
a control bar (to select drawing modes and options) and a scrollable output area.